Fig. 8From: Automated quantification of deep grey matter structures and white matter lesions using magnetic resonance imaging in relapsing remission multiple sclerosisA female patient aged 24 years, known to have RRMS with EDSS score of 3. White matter lesions segmentation: T2 FLAIR images in sagittal, coronal, and axial planes; a raw unprocessed image showing white matter hyperintense lesions located mainly at the periventricular white matter with a few small juxtacortical lesions, b T2 FLAIR image after registration to MNI template and c processed T2 FLAIR image with segmented white matter lesions. Deep grey matter structures segmentation: T1W images in sagittal, coronal, and axial planes; d raw unprocessed T1W images, e T1W images after registration to MNI template, and f and g T1W images with coloured segmented grey matter structures with thalamus in orange, caudate in red, putamen in green, and hippocampus in blue. Grey matter structures volumes after correction for ICV: Left and right thalamus: 0.00404 and 0.00329 cm3, left and right caudate: 0.00277 and 0.00272 cm3, left and right putamen: 0.00285 and 0.00270 cm3, left and right hippocampus: 0.00272 and 0.00277 cm3. White matter lesions volume: 6.75 cm3. We found that the patient had a significant decrease in the volumes of the right thalamus, and the right putamen, and she had white matter lesions volume of 6.75 cm3 and EDSS score of 3Back to article page