Fig. 6From: Automated quantification of deep grey matter structures and white matter lesions using magnetic resonance imaging in relapsing remission multiple sclerosisA female patient aged 23 years, known to have RRMS with EDSS score of 5.5. White matter lesions segmentation: T2 FLAIR images in sagittal, coronal, and axial planes; a raw unprocessed image showing white matter hyperintense lesions located at the periventricular and deep white matter, b T2 FLAIR image after registration to MNI template and c processed T2 FLAIR image with segmented white matter lesions. Deep grey matter structures segmentation: T1W images in sagittal, coronal, and axial planes; d raw unprocessed T1W images, e T1W images after registration to MNI template, and f and g T1W images with coloured segmented grey matter structures with thalamus in orange, caudate in red, putamen in green, and hippocampus in blue. Grey matter structures volumes after correction for ICV: Left and right thalamus: 0.00326 and 0.00276 cm3, left and right caudate: 0.00239 and 0.00254 cm3, left and right putamen: 0.00213 and 0.00213 cm3, left and right hippocampus: 0.00253 and 0.00262 cm3. White matter lesions volume: 10.2 cm3. We found that the patient had a significant decrease in the volumes of the thalamus and putamen bilaterally with white matter lesions volume of 10.2 cm3 and EDSS score of 5.5Back to article page